YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE13521
Organism: Caenorhabditis elegans
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13521.

Description E-value Query
Range
Subject
Range
gi|109042996, gi... - gi|109042996|ref|XP_001106444.1| PREDICTED: similar to UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosami...
CCDS3244.1_1 - null
255.0 [0..1] [318..10]

Back

Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSTQFLIFI TLVVIFLTCT RLLSKGLSEQ DERCSQAEWK TSTLLNSSRD FGSHYEISFA  60
   61 DIQGSFEWLY LPKFELNNPE ILLIATSRPD DFSRRNAIRK TWMNQKTNQI TSFFMVGLSS 120
  121 KTDEKVRDIV MREAELYRDI VVTSLEDSYT KLAFKTLSIL LYAVSKVPSA QLIGRVDGDV 180
  181 LFFPNLFQSF LDKDNYFINT NNSSIYGYIA EEGKPTTSKC CKSRNFLFPF KCSNYLSFLS 240
  241 GPFFLLTRPA AEKLLNASKH RDFHQIDDQL ITGQMADDAG VKRINLPMIH MFPEPTNDFV 300
  301 FAWHNTLNDF QYVKAYKDRI AHLPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.221849
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle