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View Structure Prediction Details

Protein: CE13357
Organism: Caenorhabditis elegans
Length: 252 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13357.

Description E-value Query
Range
Subject
Range
CE24657 - status:Predicted UniProt:Q9NA49 protein_id:CAB60551.1
151.0 [0..3] [201..8]
gi|187022649, gi... - gi|39581976|emb|CAE73838.1| Hypothetical protein CBG21408 [Caenorhabditis briggsae], gi|187022649|em...
140.0 [0..3] [186..4]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTSIVFLSL FPLTNSLQMV VVYGEPSDMS ESQEYQGLSL DDCIATCYWD NNCFLAYYSS  60
   61 VCHLFEYGNM SVKSSKSVVA FKTRNYECPS ANSSFPEFST TDRWIENDVG YENEISPVGE 120
  121 ISWKISFSIF Q

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 25.853872
Match: PF08277.3
Description: No description for PF08277.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [132-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CSNNSKIFLR DTIFVCIGVR FFPNITCGNH NSDIERENLV SKKYGNYLSL VWIDGNLGGF  60
   61 LDETHVVIPI KCHRIIAGEE LLVEKKLIES INVQISIFFV VLYPVKTTRI QKTEVSSHGF 120
  121 S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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