| Protein: | dnj-19 |
| Organism: | Caenorhabditis elegans |
| Length: | 439 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dnj-19.
| Description | E-value | Query Range |
Subject Range |
|
|
366.0 | [0..5] | [438..1] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MFGGGSSGPV DTTLYTTLNV RPDASQADIK KSYFKLAKEY HPDKNPDHGD KFKEISFAYE 60
61 VLSSPEKRRL YDARGLEGVQ GGGAGGGGGG FPGGLFSHFF GGAGGDDDDD DDDMGGHPFG 120
121 G
|
| Detection Method: |  |
| Confidence: | 19.69897 |
| Match: | 1bq0A |
| Description: | J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [122-439] |
1 11 21 31 41 51
| | | | | |
1 LFGGMGGMGR GGPRRRKFQD TVHPLNVTLE ELYVGKTSKL KLSKKALCKT CEGSGGKKGE 60
61 KYKCDACRGR GVKTIVQQIG PGMLQQMQVH CDACKGSGGK VPAGDKCKGC HGEKYENVSK 120
121 ILEVHVLPGM KHNDKITFKG DGDQSDPDGE PGDVVIVIQQ KDHDIFKRDG DDLHMTKKLS 180
181 LNEALCGYNF LIKHLDGHPL VLSSKQGDVI KPGVIRGVLG KGMPNKKYPE LKGNLFVEFE 240
241 VEFPKEHFLD DEKAYAVLKS CFPTSKVVNV TPAAAEVSLM EYDEKKYSRG RGGDAYNEDS 300
301 DEEQHGGHHG QGVRCQHQ
|
| Detection Method: | |
| Confidence: | 48.69897 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.036672061154828 | bayes_pls_golite062009 |
