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View Structure Prediction Details

Protein: CE13175
Organism: Caenorhabditis elegans
Length: 289 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13175.

Description E-value Query
Range
Subject
Range
gi|157762476 - gi|157762476|ref|XP_001673580.1| Hypothetical protein CBG23421 [Caenorhabditis briggsae AF16]
gi|187021024, gi... - gi|39592207|emb|CAE75428.1| Hypothetical protein CBG23421 [Caenorhabditis briggsae], gi|187021024|em...
254.0 [0..1] [289..1]
gi|109478960 - gi|109478960|ref|XP_001064113.1| PREDICTED: similar to CG10053-PA [Rattus norvegicus]
217.0 [0..4] [284..159]
gi|220944386, gi... - gi|220954340|gb|ACL89713.1| CG10053-PA [synthetic construct], gi|220944386|gb|ACL84736.1| CG10053-PA...
FBpp0308784, CG1... - This gene is referred to in FlyBase by the symbol Dmel\CG10053 (CG10053, FBgn0037490). It is a prote...
194.0 [0..1] [284..1]
gi|62201853, gi|... - gi|82994617|ref|XP_930498.1| PREDICTED: similar to CG10053-PA isoform 2 [Mus musculus], gi|82994615|...
190.0 [0..4] [284..7]
gi|114577063 - gi|114577063|ref|XP_515407.2| PREDICTED: similar to MGC137508 protein [Pan troglodytes]
187.0 [0..4] [284..29]
gi|73980731 - gi|73980731|ref|XP_532830.2| PREDICTED: similar to CG10053-PA [Canis familiaris]
185.0 [0..4] [284..3]
CCD75_BOVIN - Coiled-coil domain-containing protein 75 OS=Bos taurus GN=CCDC75 PE=2 SV=1
183.0 [0..4] [284..7]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDDEDDYMS AEILQGVSEQ PVGIAKSRAH KRELQINSRF EESRDTFKPK RPTSHAEREK  60
   61 ERRDEALAKP ISHESKGFAL MAKMGFKPGM TLGKQREDEI RITEPIGVDI KANRKGLGHE 120
  121 VEAVQERNER VEAVMQKMKE QAAKHEELID DYSKRRKLDA NSKQLVKDIR SCRKVCEELD 180
  181 HRIGKKVP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.250 N/A N/A d.124.1 Ribonuclease Rh-like
View Download 0.234 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain

Predicted Domain #2
Region A:
Residues: [189-289]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVSWFWRSYK VAQEETTSYH KKVEKEDEEY KYSNGLAAPE DPNYDFTMST EILEEALSTI  60
   61 NNYLRDGHFY CIWCGANFSS PEDMIEHCPG STRRAHHGED E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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