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View Structure Prediction Details

Protein: gcy-34
Organism: Caenorhabditis elegans
Length: 686 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gcy-34.

Description E-value Query
Range
Subject
Range
gi|187034268, gi... - gi|39592994|emb|CAE62608.1| Hypothetical protein CBG06726 [Caenorhabditis briggsae], gi|187034268|em...
568.0 [0..2] [686..2]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGFIHESIR QLVIRKYGED VWLQVLERSG FENGKENIVN HYYSDTDTYV LVDSVSIVLK  60
   61 VTKDQIWEMY GGFLITYSME IGWDELVRSM SPNLKGFLDN LDSLHYFIDH VVYKANLRGP 120
  121 SFRCEENPDG TLMLHYFTGR PGLYHIVKGV VKEVAKLVFN LDISLVVQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.522879
Match: 2o09A
Description: No description for 2o09A was found.

Predicted Domain #2
Region A:
Residues: [169-432]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRTQRSVHMN NGERVEEHVI FLIKNVEEPR RDSDTSTTSA LTSVEPDFGE IIDDNLKVSL  60
   61 QDFSRALPYH FVLDESCRLV QCGDELYNHI PNELLQPGTP ILRIFEINRP QIPLDFENIC 120
  121 NFINAVFVLQ VKTSPLRKKH MNAMTKEERE QEVEAMEEEV ESNELTQGCH LKLKGQMMML 180
  181 STKKHIIYLC SPYVTSINEL MQFGMRLTAM PLHDATRDLI LLNQQRLSDV EVNLQLEANN 240
  241 EQLETMTHEL EVERQKTDSI LKDM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.30103
Match: 2pvfA
Description: No description for 2pvfA was found.

Predicted Domain #3
Region A:
Residues: [433-686]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPRKIAKQLL SGEHLEPCEY EATVMFCDLP AFQQIIPVCQ PKNIVKLLNE VFFKLDRIVV  60
   61 LRGVYKVETV SDSYMTVSGI PDYTSEHAEN MCHVALGMMW EARSVMDPVN KTPFLLRIGL 120
  121 HSGTIIAGVV GTKMPRYCLF GETVTLASQM ESLGVAGKIQ CSSWTYSKAM ETGRFEFSPR 180
  181 GRINVKGRGD VETYFLMRSL KKSIWEITDH ERDVNVNSIE GYEELEIFIE NAQTVKHDGH 240
  241 PKANQNHSAT CTIA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.221849
Match: 1yk9A
Description: Crystal structure of a mutant form of the mycobacterial adenylyl cyclase Rv1625c
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle