| Protein: | CE12336 |
| Organism: | Caenorhabditis elegans |
| Length: | 596 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE12336.
| Description | E-value | Query Range |
Subject Range |
|
|
207.0 | [0..13] | [568..1] |
|
Region A: Residues: [1-472] |
1 11 21 31 41 51
| | | | | |
1 MPDNNQQADE KAAAHQDPET VEKELEDAGF IAPPDGGYGW AIVAASFLLN MIVDGVIFTV 60
61 GKILQPAWVH SFGISEASAA MTMSILSGCY FFAGPIASVL CNVFGCRQVA LAGSLIAALG 120
121 FLLSISAPNI YVLYVSFGLI AGAGFGMMYL PAIVIISQYF AKKRSVATGI AVCGSGIGTT 180
181 VFALLNDVVW DFVGGDWKQF LVYTAAVTIS GLGACILLRP LKPSKDQIEK VAKVLEDYEE 240
241 HKEKVPESPL LSKHNTPFLS SLELHTAGKL ENGHHTGSIK SIVDAVSKEI EDLNKPLLRK 300
301 DIFYSGSTTN IAARSRTGTM TREEAAEHQQ SLRFRGKVET PQQYLSKADL NAGDNGDVAI 360
361 ANESKIQEIK QALKQLVDKE LLFSPSFLLL AFSGTLTLCC FYVPFIYLGN HLDKIEGLTT 420
421 AEKSFTVSLI GVLNIVARIG CGILADRPEV SALAVNNFAL IAAGLATMTV PL
|
| Detection Method: |  |
| Confidence: | 18.0 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| binding | 0.818732184064642 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [473-596] |
1 11 21 31 41 51
| | | | | |
1 YTAYWQFLAF CVPFSIGVAC FAALRSIIVV ELIGLEKLSN AFGILLTFMG VGAVVGSPLA 60
61 AAMKDYTGNF DTSFYVMGAL MTISGAMCIP LGGLRKRELA RSDSSDAKKA IELQKLTDTQ 120
121 DNTN
|
| Detection Method: | |
| Confidence: | 2.78 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
