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View Structure Prediction Details

Protein: sodh-1
Organism: Caenorhabditis elegans
Length: 349 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sodh-1.

Description E-value Query
Range
Subject
Range
gi|40795502 - gi|40795502|gb|AAR91477.1| thermostable alcohol dehydrogenase [Geobacillus sp. M10EXG]
347.0 [0..9] [347..1]

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Predicted Domain #1
Region A:
Residues: [1-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVELPSTQR ALVFDTWNGP LEVRQVPVPS PADDEILVKI EYSGICHSDL HVWLGDLKDM  60
   61 SVCPLVGGHE GAGSVVQIGK NVTGWQLGDK AGVKLMNFNC LNCEFCKKGH EPLCHHIQNY 120
  121 GFDRSGTFQE YLTIRGVDAA KINKDTNLAA AAPILCAGVT VYKALKESNV APGQIIVLTG 180
  181 AGGGLGSLAI QYACAMGMRV VAMDHGSKEA HCKGLGAEWF VDAFETPDIV SHITKLTEGG 240
  241 PHGVINFAVA RKPMEQAVEY VRKRGTVVFV GLPKDSKVTF DTTPFIFNAI TIKGSIVGSR 300
  301 LDVDEAMEFV TRGIVKVPLE LVKLEDVPAV YQRMLDGKIN SRAVVDFSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.221849
Match: 2hcyA
Description: No description for 2hcyA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle