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View Structure Prediction Details

Protein: asah-1
Organism: Caenorhabditis elegans
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for asah-1.

Description E-value Query
Range
Subject
Range
gi|112180766 - gi|112180766|gb|AAI18456.2| MGC140781 protein [Bos taurus]
433.0 [0..5] [393..35]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRELSVLLL VAVCAAKHVE LPAPFKDHCI LDDKQNLYDP SKQFDIKWYD VNLDLPPSER  60
   61 WVQIATANKE HIADLIGVLI NLITPWFPNA IDFVDDVFGD LAPKLAQPYR DEIFSIANAT 120
  121 GIPLGQITMY NIFYEIFTV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [140-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CTSVIAQDKD GHVFHARNLD FGLFMGWDPV LHDWQISQKL RKMIINVNWL KDGKLLYKSN  60
   61 NFAGYIGIYN GLKPNAFSLT ADDRFQLVGG YYGILKWVFG LEADGKWMSW LARETLETKT 120
  121 TYLDAKEHLM NTPMLSPVYF ILGGSKKDEG CIIARSLDKT ALLTEMATSP HGWYLLETNY 180
  181 DQGTEDLYLD DRDTPGFRCM DKLTQKNVGF EGIFNVLSSR TNLNKLTTYT VLMSVETSRF 240
  241 ETILQSCPGE CYPW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.522879
Match: 2bjfA
Description: Crystal Structure of Conjugated Bile Acid Hydrolase from Clostridium perfringens in Complex with Reaction Products Taurine and Deoxycholate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle