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View Structure Prediction Details

Protein: rba-1
Organism: Caenorhabditis elegans
Length: 412 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rba-1.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
412.0 [0..4] [412..1186]

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Predicted Domain #1
Region A:
Residues: [1-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEAESCEET SKEHRIWKKN VPYLYDTVVT KEVEWPSLSV QWMPDVTKTE NSDSSMHRMI  60
   61 HGTHTCGGVQ NHLMISKFTI TTDTPEFDDA KWDSEREEFG GYGEGSAAKW DTEIKINHPG 120
  121 EVHRARYMPH NPFIIASRGP SDDVYIFDYT KHPSEPKDTK FRPQLRLKGH EGEGYGMSWS 180
  181 NTREGHLLTA GDDGMICHWD INANQTISGQ IVPQSKFKGH SSNAEDVSFH ALHNFVFGSV 240
  241 GDDRKLNLWD LRQSKPQLTA VGHTAEVNCI TFNPFSEYIL ATGSVDKTVA LWDMRNMRKK 300
  301 MYTLKHHNDE IFQVSFSPHY ETVLASSGSD DRVIVWDISK IQDPSSSSAA SSDSVPPEVI 360
  361 FIHAGHTGKV ADFSWNPNRP WTICSSDEFN ALQVWEVSNS LVSSEKWETE MI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.39794
Match: 2h9lA
Description: No description for 2h9lA was found.

YRC Informatics Platform - Version 3.0
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