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View Structure Prediction Details

Protein: CE11838
Organism: Caenorhabditis elegans
Length: 335 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE11838.

Description E-value Query
Range
Subject
Range
CE15783 - status:Partially_confirmed UniProt:O17784 protein_id:CAB07352.1
336.0 [0..6] [335..30]

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Predicted Domain #1
Region A:
Residues: [1-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNPASPLK IVLLVLTLVI VVQLYKSATA EIPPLRQESF LIMKKRLSSR MAPTARLGNH  60
   61 MFELAAVLGI SRMLNRTATF FIEDEIYRRM IESSKEAIPG LVGQFEILNG KVPLYIKNTK 120
  121 LNTRCCVFVD PLIHEHNNDE YLHLDGRFYQ AWKYFPSMRN ELIGYLKTSE NFGSLPKSNE 180
  181 TSFVTCVHIR RGDFKRVGFA ESDEWFIRKA KEFVENKEAT SKPCSHVVLF GDDLPFMKNL 240
  241 YENESTHFVS VNSPSDDLVY AKNNCDTVLI TAPHSTFGWW MGYFSKGDKV YYMDIRETRD 300
  301 NVYRNGGLNP YDYYLPHWTP LKFAGDNTTI VESLK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.21
Match: 2hhcA
Description: No description for 2hhcA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle