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View Structure Prediction Details

Protein: CE11832
Organism: Caenorhabditis elegans
Length: 314 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE11832.

Description E-value Query
Range
Subject
Range
gi|119193086, gi... - gi|90305935|gb|EAS35566.1| hypothetical protein CIMG_00920 [Coccidioides immitis RS], gi|119193086|r...
118.0 [0..54] [295..22]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRSEVKQQT VGIEIAREND SSSRPIIRVL FSVQLLSMIA VTTHHTAMPF LVKIANKSHF  60
   61 LPTTSVFMME ILKLSFCLII VLI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETRSIRKTAK KLHKNIWQNW WETMKVSVPA LVYAVQNNLY YVALANIDAT TYSVTLQLRI  60
   61 LTTAILSVVL LSKKLSGYQW MAQGMALIGE LFLKYKLDNS NSRREIAGNF WLGLASVLGM 120
  121 CWTSAFAGNI 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.23
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [214-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FHGWTWIVWL VTIGNSIGGL CISLVMKYAD NVMKTYCQSL AIGFTSIVSI CLGDRLLSLY  60
   61 LGYGVFLVTS SVVVYSLYPA TQPTTPNYKP LKQDITEDTD E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle