| Protein: | CE11816 |
| Organism: | Caenorhabditis elegans |
| Length: | 355 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE11816.
| Description | E-value | Query Range |
Subject Range |
|
|
274.0 | [0..5] | [325..10] |
|
Region A: Residues: [1-355] |
1 11 21 31 41 51
| | | | | |
1 MSLNTTASSS LNSHSYDMVE VFAMIMLPLI LIGIFGNIIS IYVYSRHHMN KNTIGFLLLS 60
61 LSTIDLIVLI TAMPSFGTYK FPFFPGYHEI GSVHTIFSAF CLIYFYPLMC MGKMMGQYII 120
121 VLISVERWFA VCRPLQVQIW CTQKNTIRAM TCIIAISILF NAPRFFEFKA NLITGVIGFG 180
181 LAHISKNEWY FYLYYGIRAI IFDALIPFSI IAVTNIQVIQ QLRKSNEERK LMTTQQQKDN 240
241 KTTTMLLVMI FMYAICHFLC TSVKFINLFS HNYVQFQFVI FKIIHHISNV LLVFYSASTF 300
301 FIYLIFSEKY RNVLSTCVTC RNTDELTVSS RGRQNTKTTR SNSQNGYTAI KNEKT
|
| Detection Method: |  |
| Confidence: | 44.09691 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
