| Protein: | fum-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 501 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fum-1.
| Description | E-value | Query Range |
Subject Range |
|
|
586.0 | [0..11] | [501..1] |
|
Region A: Residues: [1-501] |
1 11 21 31 41 51
| | | | | |
1 MSAVSMLQGE MLARGGAVIA RGASLATARN FSRTTVPMAK IRKERDTFGE LEVPADKYYG 60
61 AQTARSQMNF KIGGPEERMP IPVIHAFGIL KKAAALVNTE FGLDKKLADA ISQAADEVVD 120
121 GKLDEHFPLV TWQTGSGTQS NMNVNEVISN RAIEILGGEL GSKKPVHPND HVNMSQSSND 180
181 TFPTAMHIAV GREVNSRLLP ALKKLRTALH NKAEEFKDII KIGRTHTQDA VPLTLGQEFS 240
241 AYVTQLDNSI ARVESTLPRL YQLAAGGTAV GTGLNTRKGF AEKVAATVSE LTGLPFVTAP 300
301 NKFEALAAHD ALVEVHGALN TVAVSFMKIG NDIRFLGSGP RCGLGELSLP ENEPGSSIMP 360
361 GKVNPTQCEA ITMVAAQVMG NQVAVSVGGS NGHFELNVFK PLIVRNVLQS TRLLADSAVS 420
421 FTDHCVDGIV ANKDNIAKIM RESLMLVTAL NPHIGYDNAA KIAKTAHKNG TTLVQEAVKL 480
481 GILTEEQFAQ WVKPENMLGP K
|
| Detection Method: |  |
| Confidence: | 157.0 |
| Match: | 1yfmA |
| Description: | RECOMBINANT YEAST FUMARASE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| fumarate hydratase activity | 4.22589182982073 | bayes_pls_golite062009 |
| catalytic activity | 2.51282259572665 | bayes_pls_golite062009 |
| lyase activity | 2.31268471569846 | bayes_pls_golite062009 |
| carbon-nitrogen lyase activity | 2.2046475419807 | bayes_pls_golite062009 |
| histidine ammonia-lyase activity | 0.948129236753279 | bayes_pls_golite062009 |
| amidine-lyase activity | 0.901614580251298 | bayes_pls_golite062009 |
| binding | 0.854855116369286 | bayes_pls_golite062009 |
| argininosuccinate lyase activity | 0.617974375213548 | bayes_pls_golite062009 |
| ammonia-lyase activity | 0.491229595527877 | bayes_pls_golite062009 |
