YRC Public Data Repository - Protein Structure Prediction

Protein:	acl-1
Organism:	Caenorhabditis elegans
Length:	262 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acl-1.

Description	E-value	Query Range	Subject Range
gi\|27362190, gi\|... - gi\|27365990\|ref\|NP_761518.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio vulnificus CMCP6...	196.0	[0..22]	[260..1]
gi\|150422621, gi... - gi\|254291431\|ref\|ZP_04962223.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae AM-1... gi\|254223982, gi... - gi\|254223982\|ref\|ZP_04917811.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae RC38... gi\|153829799, gi... - gi\|153829799\|ref\|ZP_01982466.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae 623-... gi\|227082632, gi... - gi\|227082632\|ref\|YP_002811183.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae M66... gi\|121630203, gi... - gi\|121727431\|ref\|ZP_01680559.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae V52]... gi\|121546898, gi... - gi\|121591252\|ref\|ZP_01678551.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae 2740... gi\|9657096, gi\|1... - gi\|9657096\|gb\|AAF95655.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae O1 biovar ... gi\|153221986, gi... - gi\|153221986\|ref\|ZP_01952813.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae MAK ... gi\|11281547 - pir\|\|C82067 probable 1-acylglycerol-3-phosphate O-acyltransferase (EC 2.3.1.51) VC2513 - Vibrio chol... gi\|124114629, gi... - gi\|153215711\|ref\|ZP_01950092.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae 1587... gi\|153818035, gi... - gi\|153818035\|ref\|ZP_01970702.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae NCTC... gi\|149740495, gi... - gi\|153825772\|ref\|ZP_01978439.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae MZO-... gi\|125618087, gi... - gi\|254851057\|ref\|ZP_05240407.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae MO10... gi\|227014403, gi... - gi\|227118953\|ref\|YP_002820849.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae O39... gi\|153822415, gi... - gi\|153822415\|ref\|ZP_01975082.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae B33]...	196.0	[0..8]	[261..6]
gi\|157767640 - gi\|157767640\|ref\|XP_001667300.1\| Hypothetical protein CBG16005 [Caenorhabditis briggsae AF16] gi\|187026765, gi... - gi\|39596098\|emb\|CAE69734.1\| Hypothetical protein CBG16005 [Caenorhabditis briggsae], gi\|187026765\|em...	194.0	[0..1]	[262..1]
gi\|116219659, gi... - gi\|75819123\|ref\|ZP_00749220.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio chole...	193.0	[0..22]	[261..1]
gi\|59479110, gi\|... - gi\|59711009\|ref\|YP_203785.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio fischeri ES114],...	193.0	[0..20]	[261..10]
gi\|46156593, gi\|... - gi\|46156593\|ref\|ZP_00132415.2\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Haemophilus ...	193.0	[0..22]	[262..1]
gi\|113460644, gi... - gi\|23468006\|ref\|ZP_00123580.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Haemophilus ...	192.0	[0..22]	[262..1]
gi\|12720314, gi\|... - gi\|15601968\|ref\|NP_245040.1\| hypothetical protein PM0103 [Pasteurella multocida subsp. multocida str...	192.0	[0..22]	[261..1]
gi\|75827771 - gi\|75827771\|ref\|ZP_00757206.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio chole... gi\|229354934, gi... - gi\|229507429\|ref\|ZP_04396934.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae BX 3... gi\|116189455, gi... - gi\|75830552\|ref\|ZP_00759828.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio chole... gi\|75815119 - gi\|75815119\|ref\|ZP_00745644.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio chole... gi\|75824174, gi\|... - gi\|75824174\|ref\|ZP_00753637.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio chole... gi\|229338077, gi... - gi\|229524496\|ref\|ZP_04413901.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae bv. ... gi\|229516771, gi... - gi\|229516771\|ref\|ZP_04406217.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae RC9]... gi\|229513439, gi... - gi\|229513439\|ref\|ZP_04402903.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae TMA ... gi\|229353120, gi... - gi\|229509646\|ref\|ZP_04399127.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae B33]... gi\|229369591, gi... - gi\|229606936\|ref\|YP_002877584.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae MJ-... gi\|229335184, gi... - gi\|229527552\|ref\|ZP_04416944.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae 1212... tr\|A0A085QC14\|A0... - 1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Vibrio cholerae GN=DN30_1636 PE=3 SV=1	192.0	[0..22]	[261..1]
gi\|91225573, gi\|... - gi\|91225573\|ref\|ZP_01260647.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio alginolyticus ... gi\|254229288, gi... - gi\|75856340\|ref\|ZP_00763970.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio sp. E...	191.0	[0..22]	[261..1]

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Predicted Domain #1

Region A:
Residues: [1-262]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFLAILFVI AVLLLLAQLP VIGFYIRAVY FGMCLIIGGF LGGLASIPFG KSPNNHFRMF  60
   61 KIFQAMTWPM GVRFELRNSE ILHDKKPYII IANHQSALDV LGMSFAWPVD CVVMLKSSLK 120
  121 YLPGFNLCAY LCDSVYINRF SKEKALKTVD TTLHEIVTKK RKVWIYPEGT RNAEPELLPF 180
  181 KKGAFILAKQ AKIPIVPCVF SSHKFFYSHA EKRLTSGNCI IDILPEVDSS KFDSIDDLSA 240
  241 HCRKIMQAHR EKLDAEAANL NI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	5.221849
Match:	1iuqA
Description:	The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits