YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: bli-2
Organism: Caenorhabditis elegans
Length: 311 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bli-2.

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
252.0 [0..50] [310..1460]

Back

Predicted Domain #1
Region A:
Residues: [1-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEKELNHEA SMLRKVAFLG ICISTVSTLT CIIAIPLLYN YMQHVQTNLH SEIDFCRHRT  60
   61 VGLFIQYERM QSASGIKGRR IIVKKQAGYD FAESNTNAES GFSSSKSSLA PGGQCCSCKT 120
  121 GPSGPPGPPG EDGRDGRDGK PGLNGEDGTD AKDSAPRRDA AAPCYDCPVG PPGPPGNIGS 180
  181 KGQPGRNGKD GLPGVPGLPG QPGEPGDDGE PGEDGDPGQP GDNGEPGKCD EVNVAQGPPG 240
  241 SPGPPGLPGP DGLPGTPGNP GQDGEQGPAG EPGRDGKDGQ PGRPGQPGPP GEPGTGGGCE 300
  301 HCPTPRTAPG Y

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.69897
Match: 1y0fA
Description: No description for 1y0fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle