YRC Public Data Repository - Protein Structure Prediction

Protein:	orc-2
Organism:	Caenorhabditis elegans
Length:	430 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for orc-2.

Description	E-value	Query Range	Subject Range
gi\|114582759 - gi\|114582759\|ref\|XP_516023.2\| PREDICTED: origin recognition complex, subunit 2 [Pan troglodytes]	455.0	[0..4]	[423..232]

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Predicted Domain #1

Region A:
Residues: [1-230]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRPKILKRA TVQPSAAVPV KKSTPEKEGS RQKKTNGKEN ASRNLQSNLE EDLEQLGFED  60
   61 ETVSMAQSAI ENYFMQGKSA SERMNNAKSR RGRRAGNGNT EEIEEDDEIS NAITDFTKCD 120
  121 LPGLRNYITK KDNTEFEKRL EHLADNDFGK WKLYLAAGFN ILLHGVGSKR DVLTEFENEL 180
  181 SDYTYMRVDA RKDGLNVKVL LGAINENMKL NCNVKRGQST ISWARSIRRK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [231-430]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSQQLILII DNIEAPDWRS DQEAFCELLE NRDSVKLIAT VDHIYSTFIW NSRQLSSLSF  60
   61 VHITINTFEI PLQELMTGDS RLLGLDARSN QSSHTMSSLD VFWKSLAVNS QKLFRLFFQM 120
  121 YFDTKKPVKF WDLFNAAKDD FIASTDAALR TQLVEFKDHR VLKWTRGDDG NDQLSGIVEL 180
  181 RLVTEFLESK NMPLDEKKDE