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View Structure Prediction Details

Protein: CE11302
Organism: Caenorhabditis elegans
Length: 539 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE11302.

Description E-value Query
Range
Subject
Range
GPMI2_METAC, GMI... - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina acetivorans GN=gpmI2...
GPMI2_METAC - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina acetivorans (strain ...
690.0 [0..18] [536..1]

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Predicted Domain #1
Region A:
Residues: [1-539]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVALGAQIY RQYFGRRGMA MANNSSVANK VCLIVIDGWG VSEDPYGNAI LNAQTPVMDK  60
   61 LCSGNWAQIE AHGLHVGLPE GLMGNSEVGH LNIGAGRVIY QDIVRINLAV KNNKFVTNES 120
  121 LVDACDRAKN GNGRLHLAGL VSDGGVHSHI DHMFALVKAI KELGVPELYL HFYGDGRDTS 180
  181 PNSGVGFLEQ TLEFLEKTTG YGKLATVVGR YYAMDRDNRW ERINVAYEAM IGGVGETSDE 240
  241 AGVVEVVRKR YAADETDEFL KPIILQGEKG RVQNDDTIIF FDYRADRMRE ISAAMGMDRY 300
  301 KDCNSKLAHP SNLQVYGMTQ YKAEFPFKSL FPPASNKNVL AEWLAEQKVS QFHCAETEKY 360
  361 AHVTFFFNGG LEKQFEGEER CLVPSPKVAT YDLQPEMSAA GVADKMIEQL EAGTHPFIMC 420
  421 NFAPPDMVGH TGVYEAAVKA CEATDIAIGR IYEATQKHGY SLMVTADHGN AEKMKAPDGG 480
  481 KHTAHTCYRV PLTLSHPGFK FVDPADRHPA LCDVAPTVLA IMGLPQPAEM TGVSIVQKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1ejjA
Description: 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain; 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoglycerate mutase activity 4.09705445001692 bayes_pls_golite062009
hydrolase activity 3.01886601704869 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 2.80771517640162 bayes_pls_golite062009
catalytic activity 2.31328968099128 bayes_pls_golite062009
intramolecular transferase activity, phosphotransferases 1.84947276418569 bayes_pls_golite062009
binding 0.727515968610877 bayes_pls_golite062009
intramolecular transferase activity 0.343539964510921 bayes_pls_golite062009
protein binding 0.0855749430431131 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle