| Protein: | giyd-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 443 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for giyd-1.
| Description | E-value | Query Range |
Subject Range |
|
|
410.0 | [0..1] | [437..1] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 METFILSSDS DDDSGPPPSK RRTIEGIPRS FSGDKKIRFS FGASNMSQDT TQEIIPEDTD 60
61 TVPLTIPSTP ALSGKFDSKT PKSVRRRSVS MSCFTPIVET INQPPTNQAC SSFLQKE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [118-168] |
1 11 21 31 41 51
| | | | | |
1 YNFHDLSSDE EGGDGGAGCS KDEDKIIEDN LNLRALLSPE KKKRKEKIEE V
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [169-265] |
1 11 21 31 41 51
| | | | | |
1 QNEFYGVYCL ISRSDRPCYK NRCYIGYTVD PNRRIMQHNG GRDKGGAKKT DSRGPWDMVC 60
61 VVHGFPNHVA ALHFEWAWQN PLVSKSLKEK QLRKERK
|
| Detection Method: | |
| Confidence: | 21.69897 |
| Match: | 1zg2A |
| Description: | Solution NMR structure of the UPF0213 protein BH0048 from Bacillus halodurans. Northeast Structural Genomics target BhR2. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [266-443] |
1 11 21 31 41 51
| | | | | |
1 ETPFAFQLRI ACELMNSSAF CRFALTFRWL ITTEELPFPT SCVPPDHTKL RFGKVKKEMS 60
61 LVPSKREDYL EMGECRICGK DIEKLWSLVR CISATCPSHF HSKCLSENGL KLKNEHVDHV 120
121 YPLKANCPTC GQFYLWGDII REQRRIIKIS TKCAEEFQNM VVRKELPHRE ISPISSKK
|
| Detection Method: | |
| Confidence: | 2.32 |
| Match: | 2cklB |
| Description: | No description for 2cklB was found. |
