| Protein: | twk-24 |
| Organism: | Caenorhabditis elegans |
| Length: | 569 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-24.
| Description | E-value | Query Range |
Subject Range |
|
|
205.0 | [0..185] | [569..233] |
|
Region A: Residues: [1-569] |
1 11 21 31 41 51
| | | | | |
1 MNGTTKKDDK IVAGRSKSAD SKWKDRMNRG LGNMSKSLPS FNKNAANAKS DKTSDTKVVI 60
61 EDESKKKKKK KKKDKNLDVE ELPQQEDPEV LAAKEKEKKA KVMIASRDAR NKTMWRHIAW 120
121 LVVLFSFSLF GGVIFSAIEG GYETTQLIKK FEHEKDVYER RKIYQEQLFQ RLREIEHDNT 180
181 NPRGRNSSRE HFKLEQSRHA LEWYEQKMGV TIEEPQMRET KWNLWGGVYY SASLYTTIGY 240
241 GNFHPLTKSG RIISMMYACI GIPLVFTILL DWGFLYFTWI EYGWNRFNEN FCQKSLQRDM 300
301 QRRIRRERIR RVGSELSLSS TAPLLHRTTT QLSNPVQHIE SNHPLSPLDV DVPMGEQVQT 360
361 VPIKSAAIFF FLWIMISAFI VRLWEYEWTY FTAFYFFFTS LTTIGLGDVV TKTPNFIIFN 420
421 LAMTLIGLSV VGLCAAIVQA KVKLVFDRML RSIDAQYRIR QVDPHVATMS IVEDEEEGVK 480
481 RLIQSQSLED RIIFLFVDEH KKSMLKERIT QTYPSKADKY VQTGQRVYDQ RQGSDEDLSD 540
541 EDEEDVEYDE LGNKIIPPPI RRYIYTVFD
|
| Detection Method: |  |
| Confidence: | 42.30103 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
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