YRC Public Data Repository - Protein Structure Prediction

Protein:	CE10936
Organism:	Caenorhabditis elegans
Length:	283 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10936.

Description	E-value	Query Range	Subject Range
gi\|3493209, gi\|1... - gi\|51094823\|gb\|EAL24069.1\| aldo-keto reductase family 1, member B10 (aldose reductase) [Homo sapiens...	295.0	[0..3]	[273..5]
orf19.4317, orf1... - GRE3 CGDID:CAL0000925 Assembly 19, Contig19-10202 (177570, 176455) CDS, reverse complemented, transl... gi\|68470494, gi\|... - gi\|68470757\|ref\|XP_720624.1\| hypothetical protein CaO19.4317 [Candida albicans SC5314], gi\|68470494\|...	295.0	[0..2]	[280..56]
gi\|60832697 - gi\|60832697\|gb\|AAX37021.1\| aldo-keto reductase family 1 member B10 [synthetic construct]	295.0	[0..3]	[273..5]
gi\|15208400 - gi\|15208400\|dbj\|BAB63207.1\| 3(20)alpha-hydroxysteroid/dihydrodiol/indanol dehydrogenase [Macaca fusc... AK1C1_MACFU - Aldo-keto reductase family 1 member C1 homolog OS=Macaca fuscata fuscata GN=AKR1C1 PE=2 SV=1 gi\|109088079, gi... - gi\|109088083\|ref\|XP_001103887.1\| PREDICTED: aldo-keto reductase family 1, member C1 isoform 5 [Macac...	295.0	[0..3]	[281..8]
gi\|14330324, gi\|... - gi\|45382879\|ref\|NP_989960.1\| aldo-keto reductase family 1, member B10 [Gallus gallus], gi\|14330324\|e...	295.0	[0..5]	[276..8]
gi\|110086506 - gi\|110086506\|gb\|ABG49458.1\| xylose reductase [Candida tropicalis]	294.0	[0..2]	[280..9]

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Predicted Domain #1

Region A:
Residues: [1-283]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIKLNTGYD CPLIGLGTYK IIGDQVLPVL DAALTAGYRL FDTAKVYNNE KEIGDALEIL  60
   61 LPKHNLKRED IFITTKMHPN TVENVKKLVD ESLSLLKTSY IDMYLIHYPK SFDYGDQDPM 120
  121 NKTLRIATWN DLWECKNAGK IRSVGVSSFE IRHLEELKDL GKNFPPCCNQ VEYHPHFTRE 180
  181 ELKNYCKSEG IFFQAFSSLA RHNETLLSSE IITRLAEKYH VPKTTVLLSW ATSQKVGIIP 240
  241 KSTNPERLAQ NLKTVLLEEE EVKKICNLNL DKHYVRTTGW LVL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	80.09691
Match:	1zuaX
Description:	No description for 1zuaX was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits