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View Structure Prediction Details

Protein: CE10920
Organism: Caenorhabditis elegans
Length: 339 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10920.

Description E-value Query
Range
Subject
Range
CE37509 - status:Confirmed UniProt:O45394 protein_id:CAB05497.2
394.0 [0..1] [339..1]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLELDKDKKV LIGCLASSFI FYHTARQIYS YVSAKSREWV PIGIVKGLHI YPIKSCKPVD  60
   61 VFAFKCTKLG PMMEELEDRV FVLVEESTGK FITARQKPKL VNVESYMTDG ILEISVPGHP 120
  121 KLSVDLKKVV ENGRTIRATL FDNLQQDGYD CGDEVAKLLS DYIEEPNYRL LFSKEGLYTE 180
  181 R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.0
Match: 2exnA
Description: Solution structure for the protein coded by gene locus BB0938 of Bordetella bronchiseptica. Northeast Structural Genomics target BoR11.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [182-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TCIPDDQWWN TPVPKRKDNS GFTDLAPFLI ATEASLKAVN EKLDKKVTMR NFRPSIYIEG  60
   61 CAAWDEDKWA EIRIGEAHLE CFAPCTRCVL TTVDPEKGEM SKEMQPLKKL REFRLAPEGK 120
  121 MSKAHKDSPV FGVYAGTVNE AYIHIGQTAY VKYKPTVF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.11
Match: 1oruA
Description: Crystal Structure of APC1665, YUAD protein from Bacillus subtilis
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.125452850367999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle