Protein: | CE10896 |
Organism: | Caenorhabditis elegans |
Length: | 342 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10896.
Description | E-value | Query Range |
Subject Range |
|
163.0 | [0..73] | [280..7] |
Region A: Residues: [1-71] |
1 11 21 31 41 51 | | | | | | 1 MRIRSRGQPF RKSKCDQSID NKNQFEVLKE EARVCASIAR TRMLVPLTAI VTTSLPMVAA 60 61 IAFCAKNRKT V |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [72-219] |
1 11 21 31 41 51 | | | | | | 1 HAKNKNKNKS SKSAKSSKST RGASKSGKSR RSSKAKHSKR SSKSSKKGTS GKSGKGSSKR 60 61 GGKSSKSSKS KKVKTATTSG SQVSTVSAAT GVSDKQSNSS KSSRKSSKSS KSRKNRRLDS 120 121 DAQKKMEKSG KSGKVALIPK TQQTTGSQ |
Detection Method: | |
Confidence: | 1.03 |
Match: | 2j63A |
Description: | No description for 2j63A was found. |
Region A: Residues: [220-342] |
1 11 21 31 41 51 | | | | | | 1 VGHSLAEEVN SIKHSKEMNV APAKLQYQTL GGVNQIELKN TSNERKAYKI KCSDNSLYRV 60 61 NPVYGFAEPR SSVKIDVLRL NGEQKTDKLV LLTANANGST NPHEAFANQA EHREMMVVPL 120 121 VAA |
Detection Method: | |
Confidence: | 34.69897 |
Match: | 1rowA |
Description: | Structure of SSP-19, an MSP-domain protein like family member in Caenorhabditis elegans |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.653234420802729 | bayes_pls_golite062009 |
protein binding | 0.170808849690486 | bayes_pls_golite062009 |