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View Structure Prediction Details

Protein: CE10772
Organism: Caenorhabditis elegans
Length: 168 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10772.

Description E-value Query
Range		 Subject
Range
gi|109039102 - gi|109039102|ref|XP_001083320.1| PREDICTED: similar to protein kinase C, delta [Macaca mulatta]
 176.0 [0..3] [168..599]
gi|33304013 - gi|33304013|gb|AAQ02514.1| protein kinase C, delta [synthetic construct]
 173.0 [0..3] [168..135]
PRKCD - protein kinase C, delta
 173.0 [0..3] [168..135]
gi|53131222, gi|... - gi|57524924|ref|NP_001006133.1| protein kinase C, delta [Gallus gallus], gi|53131222|emb|CAG31801.1|...
 171.0 [0..1] [168..131]
gi|76678709 - gi|76678709|ref|XP_877645.1| PREDICTED: similar to protein kinase C, delta isoform 5 [Bos taurus]
 171.0 [0..3] [168..135]
gi|74188228 - gi|74188228|dbj|BAE25785.1| unnamed protein product [Mus musculus]
 170.0 [0..1] [168..131]

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Predicted Domain #1
Region A:
Residues: [1-92] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTEPQFENP FIDRQLDGSK IHEISGHRFK ATALVQPTCC AICSKLIYGL GKQGYRCLGC  60
   61 ETVVHKRCHS LINDRCNFGP SSPRQPPPQE LS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.39794
Match: 2db6A
Description: No description for 2db6A was found.

Predicted Domain #2
Region A:
Residues: [93-168] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDSGELRHRI PSPTEPQVST NHHFNKHFYT RPTFCDHCGS LLYGLSKQGV QCSDCLANVH  60
   61 HRCKEKAVHN CIVSSQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.0
Match: 1xa6A
Description: Crystal Structure of the Human Beta2-Chimaerin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0980674097362609 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle