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View Structure Prediction Details

Protein: CE10628
Organism: Caenorhabditis elegans
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10628.

Description E-value Query
Range
Subject
Range
PTPRS - protein tyrosine phosphatase, receptor type, S
368.0 [0..2] [372..1323]

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Predicted Domain #1
Region A:
Residues: [1-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCFSRKCVVA NESDRVSPIL SRENSDTSSE RDYPESIVWP NTAQSRRMHV SIVRPWVHHT  60
   61 LNKGVSKLRD EFSEVANKNP NVPVDAFKSN PEKNRYTDIK CIEKTRVILT TDGASSDYIH 120
  121 ANYVGISIKP KKFICTQGPK DSTIYDFWAM VIQDNVESII MLCKVIELAR VKCEQYWPAV 180
  181 EGQTNTYVSK GHTITINNLG VGTLSPDDDF INVTNLELVW AGKTRSITHY QWTNWPDHGA 240
  241 PPINMGAINL IEAVNYDTNP VVVHCSAGVG RSGTIVGISL IMDKMIQGIN CKDMKKLVEE 300
  301 IRNQRHYAIQ TEAQYMYIHR VLLEYFLELH KETYEGLLLT KNYEEKYAKW LDDYNTYAEA 360
  361 NDRTQAAKAA RAAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.30103
Match: 2fh7A
Description: Crystal structure of the phosphatase domains of human PTP SIGMA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle