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View Structure Prediction Details

Protein: CE10616
Organism: Caenorhabditis elegans
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10616.

Description E-value Query
Range
Subject
Range
gi|9507011, gi|2... - gi|9507011|ref|NP_062013.1| protein tyrosine phosphatase, receptor type, S [Rattus norvegicus], gi|2...
354.0 [0..8] [361..1238]

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Predicted Domain #1
Region A:
Residues: [1-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCFAKKNKNS TLEQKKKDPE ITESSKNSSQ PSQVPAATPT AAPPSKAHQK AMIVVKPWVQ  60
   61 RTLDMGVQAL VDEFRVLAKW TPEGMTTEAF SANTDKNRYQ DVPCQDKGRI VVKFPGLASD 120
  121 YIHANYLGTA TNPKKFICAQ GPLENTQHSF WAMAIQEKVE CVIMLCNCIE TGKIKCHQYW 180
  181 PLEQGQKLVF GEAPNTISVA NLGAKKMAPD EQCINVTTLK VDWGQGSRTI QHLQWENWPD 240
  241 RGVPQTNLTA INLLSATRGN QNPILVHCSA GIGRTGTIVA IAYVQDKMMA GENCMAMNEL 300
  301 IKELRSHRPW SIQNEFQYLY LHRVLLSYFL ERYKETYAEL LVGDYGEKYK KWADDYAAAT 360
  361 ATK

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Detection Method: PSI-BLAST
Confidence: 89.522879
Match: 2fh7A
Description: Crystal structure of the phosphatase domains of human PTP SIGMA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle