YRC Public Data Repository - Protein Structure Prediction

Protein:	CE10482
Organism:	Caenorhabditis elegans
Length:	257 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10482.

Description	E-value	Query Range	Subject Range
gi\|25290699, gi\|... - gi\|6633848\|gb\|AAF19707.1\|AC008047_14 F2K11.18 [Arabidopsis thaliana], gi\|25290699\|pir\|\|B96660 protei...	182.0	[0..4]	[257..649]
gi\|145408869, gi... - gi\|82499630\|ref\|ZP_00885070.1\| ATPase, E1-E2 type:Copper ion-binding:Copper-translocating P-type ATP...	180.0	[0..4]	[257..495]
gi\|19713692, gi\|... - gi\|19713692\|gb\|AAL94451.1\| Copper-exporting ATPase [Fusobacterium nucleatum subsp. nucleatum ATCC 25...	179.0	[0..1]	[257..438]
gi\|37197870, gi\|... - gi\|37679128\|ref\|NP_933737.1\| cation transport ATPase [Vibrio vulnificus YJ016], gi\|37197870\|dbj\|BAC9...	178.0	[0..1]	[257..586]
gi\|76151977 - gi\|76151977\|gb\|ABA39707.1\| TcrA [Enterococcus faecium]	178.0	[0..2]	[256..476]
gi\|28895288, gi\|... - gi\|28895288\|ref\|NP_801638.1\| putative cation transporting ATP-ase - copper transport operon [Strepto... gi\|21911027, gi\|... - gi\|21911027\|ref\|NP_665295.1\| putative copper-transporting ATPase [Streptococcus pyogenes MGAS315], g...	177.0	[0..3]	[257..420]
gi\|66780411, gi\|... - gi\|94972060\|ref\|YP_594100.1\| heavy metal translocating P-type ATPase [Deinococcus geothermalis DSM 1...	177.0	[0..15]	[257..498]
gi\|94548422, gi\|... - gi\|94994914\|ref\|YP_603012.1\| Copper-exporting ATPase [Streptococcus pyogenes MGAS10750], gi\|94548422...	177.0	[0..3]	[257..420]
gi\|72123354, gi\|... - gi\|72384011\|ref\|YP_293365.1\| ATPase, E1-E2 type:copper-translocating P-type ATPase:heavy metal trans...	176.0	[0..2]	[257..481]
gi\|83590824, gi\|... - gi\|83590824\|ref\|YP_430833.1\| heavy metal translocating P-type ATPase [Moorella thermoacetica ATCC 39...	176.0	[0..16]	[257..518]

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Predicted Domain #1

Region A:
Residues: [1-257]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVITNLRNV WNSHFMFLLI AVYTLSSNLN CFWYKKSFFK YENTLRIETS TGLVLFPKIA  60
   61 QSLGLCLAEN KVKPGLLAEG TTGQIANEIS SLLMDNGIKS FEAREITNNS LTNSYDKILS 120
  121 TDLVKELADT VALFTRLKQH GTKIAVCTAD NRKSSLLALK RMNVDHLVDM IVCGDDKNTA 180
  181 PKPSPHNAIK ICKHLGVDQS KAIMVGDTRV DMEMAHNAEL GAAVGVLSGI GCKDHLHRAD 240
  241 VLLEHIGHLV NTFYENR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.69897
Match:	2iyeA
Description:	No description for 2iyeA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits