YRC Public Data Repository - Protein Structure Prediction

Protein:	CE10108
Organism:	Caenorhabditis elegans
Length:	62 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10108.

Description	E-value	Query Range	Subject Range
AGAP001791-PA - Endothelin converting enzyme 1\|protein_coding\|2R:10512947:10516462:1\|gene:AGAP001791 gi\|118794093, gi... - gi\|118794093\|ref\|XP_321277.3\| ENSANGP00000008439 [Anopheles gambiae str. PEST], gi\|116116127\|gb\|EAA0...	107.0	[0..3]	[62..709]
gi\|73990737 - gi\|73990737\|ref\|XP_534313.2\| PREDICTED: similar to membrane metallo endopeptidase [Canis familiaris]	107.0	[0..3]	[62..691]
gi\|110761886 - gi\|110761886\|ref\|XP_393860.3\| PREDICTED: similar to Neprilysin 2 CG9761-PA [Apis mellifera]	107.0	[0..4]	[62..748]
CE11095 - Zinc-binding metalloprotease status:Partially_confirmed UniProt:O45569 protein_id:CAB05739.1	106.0	[0..3]	[62..1524]
gi\|108873963, gi... - gi\|157124492\|ref\|XP_001654072.1\| neprilysin [Aedes aegypti], gi\|108873963\|gb\|EAT38188.1\| neprilysin ...	106.0	[0..3]	[62..708]
NEP_RABIT - Neprilysin OS=Oryctolagus cuniculus GN=MME PE=1 SV=2	105.0	[0..3]	[62..692]
gi\|114589948, gi... - gi\|55621352\|ref\|XP_516827.1\| PREDICTED: hypothetical protein isoform 11 [Pan troglodytes], gi\|114589...	105.0	[0..3]	[62..692]
gi\|161172191, gi... - gi\|71041994\|pdb\|1Y8J\|A Chain A, Crystal Structure Of Human Nep Complexed With An Imidazo[4, 5-C]pyri...	105.0	[0..3]	[62..638]
gi\|55725075\|emb\|... - hypothetical protein [Pongo pygmaeus] gi\|55725075 - gi\|55725075\|emb\|CAH89405.1\| hypothetical protein [Pongo abelii]	105.0	[0..3]	[62..692]

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Predicted Domain #1

Region A:
Residues: [1-62]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQIVEEMED PKKKPELKTI SDKFPTSNSI SDRLKTTLVK FAKAFNCPIG SPMNPEKKCK  60
   61 MF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.39794
Match:	1dmtA
Description:	Neutral endopeptidase (neprilysin)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits