| Protein: | gi|7500762 |
| Organism: | Caenorhabditis elegans |
| Length: | 276 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7500762.
| Description | E-value | Query Range |
Subject Range |
|
|
200.0 | [0..42] | [256..2] |
|
|
199.0 | [0..50] | [254..3] |
|
|
195.0 | [0..42] | [252..2] |
|
|
195.0 | [0..51] | [254..3] |
|
|
194.0 | [0..50] | [243..5] |
|
Region A: Residues: [1-65] |
1 11 21 31 41 51
| | | | | |
1 MFQKSTIVMI FALFCISSCQ VLYTPEVVSS PYYYASSPVA SAYPYAYAYG AAAYPTAYYG 60
61 WGSNK
|
| Detection Method: |  |
| Confidence: | 23.508638 |
| Match: | PF07312.2 |
| Description: | No description for PF07312.2 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [66-185] |
1 11 21 31 41 51
| | | | | |
1 GQQAPSSAPT QKLTNNQGFT VEFPTKNGVA LHISVRMGSY GQNVIVFNHL QRGRWHREEH 60
61 HQNTIMFGRP FCMRIHNEHR KYSIHVDGHH IGHYHHHKCP KRIVAMTVRG DLRVGKIHFE 120
121
|
| Detection Method: | |
| Confidence: | 38.39794 |
| Match: | 1a3kA |
| Description: | X-RAY CRYSTAL STRUCTURE OF THE HUMAN GALECTIN-3 CARBOHYDRATE RECOGNITION DOMAIN (CRD) AT 2.1 ANGSTROM RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [186-276] |
1 11 21 31 41 51
| | | | | |
1 NFKHHNGGGT EIGVMQMPVA PTPIVVAQPP PPMIVPQPQI VPVVQQIMQP MVQPIYPSVQ 60
61 PIVYPTATPI IYTQPEVIYM DGYHHHRHHH Y
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.330 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.312 | N/A | N/A | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.308 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.286 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.285 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.253 | N/A | N/A | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.215 | N/A | N/A | d.150.1 | 4'-phosphopantetheinyl transferase |
