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View Structure Prediction Details

Protein: CE09946
Organism: Caenorhabditis elegans
Length: 167 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09946.

Description E-value Query
Range
Subject
Range
gi|187029508, gi... - gi|39589744|emb|CAE66979.1| Hypothetical protein CBG12375 [Caenorhabditis briggsae], gi|187029508|em...
gi|157746571 - gi|157746571|ref|XP_001668381.1| Hypothetical protein CBG12375 [Caenorhabditis briggsae AF16]
326.0 [0..1] [167..1]
CE02199 - status:Confirmed UniProt:Q19708 protein_id:CAA90356.1
281.0 [0..13] [167..8]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSLLTPRL VTKNTIARIV LVRNASSGLT LKHEQTIKIN DQQGFFKYQR DVSRDTRYSN  60
   61 PAKPGDTAAR FMFRKLGHAY EIYPLFGLLA IWCVLFGYTV WYSFEKAEIW LDRSHTVAPW 120
  121 DWERIRNNYW KKPTLVFDPT GVTHQRLEIL ETLQDEMVAA AKERGTR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle