| Protein: | atx-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 317 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for atx-3.
| Description | E-value | Query Range |
Subject Range |
|
|
394.0 | [0..2] | [305..24] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MSKDDPINSI FFEHQEAALC AQHALNMLLQ DALYKWQDLR DLAIQMDKME QQILGNANPT 60
61 PGRSENMNES GYFSIQVLEK ALETFSLKLT NIENPAMVDY KNNPLTARAY ICNLREHWFV 120
121 LRKFGNQWFE LNSVNRGPKL LSDTYVSMFL HQVSSEGYSI FVVQGVLPRS DADDLISLCP 180
181 VVP
|
| Detection Method: |  |
| Confidence: | 80.154902 |
| Match: | 2agaA |
| Description: | De-ubiquitinating function of ataxin-3: insights from the solution structure of the Josephin domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [184-317] |
1 11 21 31 41 51
| | | | | |
1 PKVTPKKEQK LEKVMTKFFN TVGKRLGGGS GAPPDSQEEK DLAIAFAMSM ETKDGSEVSR 60
61 SSAEIDEENL RKAIELSQAP GPSEPAEIPL LTRSRSSTPP GASEPFSNAE QQRRDRQKFL 120
121 ERFEKKKEER NDEK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
