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View Structure Prediction Details

Protein: acs-2
Organism: Caenorhabditis elegans
Length: 618 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acs-2.

Description E-value Query
Range
Subject
Range
gi|186686297, gi... - gi|23126660|ref|ZP_00108549.1| COG0365: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Nostoc...
564.0 [0..10] [618..31]

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Predicted Domain #1
Region A:
Residues: [1-618]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSILVSRRF AHVLTSTHAA PSTSNIPTTD SHHLTHPSVH RQHTNSYIHG TSNIPLRNET  60
   61 LGQTLRNTTE RVPDKEFCVF SKYPIRKTYE EFYHDVRQMA ASLYTLGLEK GDRVGVWGPN 120
  121 YYEWVVLQYA CAFAGVIQVN VNPHYLHEEL RFVMRKTGMK VLFAPKRHKH SNYVHTMLEA 180
  181 MPEMRRGQPG VGHIKSHDIP ELRHIVLYGD DVPVHGAWVY SDLIHAAGSA ERAKLEDMDR 240
  241 KLRPDEPVNM QFTSGTTGHP KGATLTHFGL NNNAYFAGIR LGWDREDHRI CIPNPLYHCF 300
  301 GCAVGVINAV NHGQTVVFPS KSYHVPDIFE AIQNEKCTTM FGTPTMFIDV LKSPLMKQFD 360
  361 ISSLRGGVIG GAPCPMALCE KMVKEMRMTD FSVIYGSTET SPLVTMSELH VDPFERIKSV 420
  421 GSVMPHQELA IVDEFGVPVP TGAKGELWSR GYSTMLGYWA DHDKTNLAIT RDRWYKSGDT 480
  481 ATMNEDGTIN IVGRTRDMIV KGGENVYPTE IEQFLHKLDY VADAHVVGVP DDRYGENICA 540
  541 WVRLRVEDEG KITAEHIKKA CKRGMAHYKV PKYVLIKKES EFPLTISGKV KKFEIQKISK 600
  601 ELLGLGTVKS HFTEAVDN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 157.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle