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View Structure Prediction Details

Protein: CE09715
Organism: Caenorhabditis elegans
Length: 252 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09715.

Description E-value Query
Range
Subject
Range
gi|39589685, gi|... - gi|39589685|emb|CAE66920.1| Hypothetical protein CBG12308 [Caenorhabditis briggsae], gi|187029448|em...
gi|157746453 - gi|157746453|ref|XP_001668322.1| Hypothetical protein CBG12308 [Caenorhabditis briggsae AF16]
247.0 [0..1] [252..1]
CE36932 - status:Confirmed UniProt:Q6BEW1 protein_id:AAT68894.1
235.0 [0..1] [252..1]
Ctr1C-PB - The gene Copper transporter 1C is referred to in FlyBase by the symbol Dmel\Ctr1C (CG15551, FBgn0062...
175.0 [0..29] [237..8]
gi|18495789 - gi|18495789|emb|CAC87892.1| surface protein [Theileria annulata]
166.0 [0..21] [251..108]
gi|47575788, gi|... - gi|89273850|emb|CAJ83621.1| solute carrier family 31 (copper transporters), member 1 [Xenopus tropic...
159.0 [0..43] [250..3]
gi|28201980, gi|... - gi|28201980|ref|NP_780299.1| solute carrier family 31, member 1 [Mus musculus], gi|26338440|dbj|BAC3...
157.0 [0..47] [250..20]

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Predicted Domain #1
Region A:
Residues: [1-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTQLAILGW LAVALVVAAA ENKSAYAQAA DNFLDELAGK EVEAVPVPDE KDQNEHHEHS  60
   61 SHGSHAGHGG HEGHMMKMWF HGGFEEVILF DFWRTDSLFG MLLSCAAIFI MGATYEGVKW 120
  121 FRVFLQMTQT QAQVLANKSC VETTRSSGGT CHQSVTHSQS NKPQSEPFLI SASVARTPAT 180
  181 SPFSPQRLIQ MLLYIFQLVL AYWLMLIVMT YNTYLTAAVV LGAGFGHWLF AVLQLRNCDG 240
  241 EVTDSFQTDA CH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 71.29243
Match: PF04145.6
Description: No description for PF04145.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle