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View Structure Prediction Details

Protein: CE09686
Organism: Caenorhabditis elegans
Length: 137 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09686.

Description E-value Query
Range
Subject
Range
gi|187036028, gi... - gi|39595197|emb|CAE60234.1| Hypothetical protein CBG03806 [Caenorhabditis briggsae], gi|187036028|em...
gi|157745751 - gi|157745751|ref|XP_001667972.1| Hypothetical protein CBG03806 [Caenorhabditis briggsae AF16]
259.0 [0..1] [137..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINIFNSPID PSQLDEFAQG KQQEDGDEQI FDVKKRKPQV TYSGDGRRML DGVVEKQHES  60
   61 NALWTTAITR GVANEWREEA TGTRLQKTKR YLSKVTYDAQ VLVRQTYRRH GTEILIATNV 120
  121 ILLLLFLYIC RLFPFNK

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.418 a.60.10 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
View Download 0.302 a.60.9 lambda integrase-like, N-terminal domain
View Download 0.301 a.60.10 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
View Download 0.291 d.54.1 Enolase N-terminal domain-like
View Download 0.283 d.67.3 Ribosome recycling factor, RRF


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