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View Structure Prediction Details

Protein: del-3
Organism: Caenorhabditis elegans
Length: 487 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for del-3.

Description E-value Query
Range
Subject
Range
gi|157744661 - gi|157744661|ref|XP_001667427.1| Hypothetical protein CBG00282 [Caenorhabditis briggsae AF16]
gi|187039186, gi... - gi|39581042|emb|CAE57344.1| Hypothetical protein CBG00282 [Caenorhabditis briggsae], gi|187039186|em...
975.0 [0..1] [486..1]

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Predicted Domain #1
Region A:
Residues: [1-487]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLRGLFGGL FFLFLLCSCV ALFVLHSLYF IFRTASQTEK TESKTVHDDQ LFIPALVICN  60
   61 RMPFSQDGLN NVNVNLRQDS ALRYLLEWTN PSLREAADYV APSADLMNQG QNTVLQYITQ 120
  121 STRNQTIQNM QYQCQSVINS CTYQGIQLSS FDCCRNLLSM IPSTNGLCWV WKDSTMWQNS 180
  181 TGINRQFSIT FQMTRNSWFS TYVPTHPGVD IYLREDGNDV MRMATELENP IRLLDKRGVR 240
  241 LQMRKTKKAD IRRTSCGYAL GDARRSDEHA FKNNHTNYLM CNMLVAMRYC SCHPLMAELI 300
  301 HYDPSSYRDF LLRVTQTSVC SVDAYDNCAR RYIDLTRIEN WEEDIPKDLP GYEDAKKCRN 360
  361 DNQRSCLITS YPGTIEGYDL PEEYRTTQDY VSRLVLEYST MRTTEILVSK DPNIYELLSF 420
  421 IGYNMALWFT VGHILWSMFW YATGLCCPKR QSSNRISPEI RRKRSVSSPE PIVVEHRPSQ 480
  481 DVASGDT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 10.7
Match: 2qtsA
Description: No description for 2qtsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle