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View Structure Prediction Details

Protein: stdh-4
Organism: Caenorhabditis elegans
Length: 314 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for stdh-4.

Description E-value Query
Range
Subject
Range
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima GN=fabG PE=3 SV=1
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / D...
271.0 [0..50] [303..2]

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Predicted Domain #1
Region A:
Residues: [1-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFSLNLDEN LLIMIIVIAY TLQFLYHLIK ISLNIFGVYI FYTPIDLKRT AGASWAVVTG  60
   61 ATDGIGRSYA LDLARRGFNI FLISRTKSKL VKTKKQILNK YSDIEVRYAI CDFTRVSYED 120
  121 YKRLLHSLNE VDIGILINNV GMCFDNPEVL HRVEGGIDTL TNVINVNILP LTAGILPQMM 180
  181 ARKSGIIVNI GSAAGSIHMA KWSVYSATKK YIEWFTSILQ KEYENEGIIC QTITPLLVST 240
  241 NMIKNPLSSI FCPNSDSFAK SSLNTIGNSS STTGYITHQI QFELIKFVPE IIIDLFVKNL 300
  301 NNQLLDYQLD KKRV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.522879
Match: 2p68A
Description: No description for 2p68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle