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View Structure Prediction Details

Protein: CE09624
Organism: Caenorhabditis elegans
Length: 462 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09624.

Description E-value Query
Range
Subject
Range
gi|149030530, gi... - gi|54035469|gb|AAH83543.1| 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial) [Rattus ...
346.0 [0..1] [450..39]

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Predicted Domain #1
Region A:
Residues: [1-462]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLGQLSYTP VTDVGIGAIE LYFPQNFVDQ NDLEKFNNVS SGKYTIGLGQ QQMGFCSDNE  60
   61 DIVSISLTVT RKLIETYKIS TDSIGCLVVG TETMIDKSKS VKTALMDLFP GNSDIEGVDI 120
  121 KNACFGGAQA LLHAIDWVTV NHPLDKKNAI VVVADIAIYE EGPARCTGGA GAIAFLICPD 180
  181 ASIPIDRQFS ACHMKNTWDF FKPITPIPSE YPVVDGSLSL SSYLEAVRMT YTYFISKVNR 240
  241 HTTGIDGLNS FDGVFLHSPF TKMVQKGLAV MNYTDSQLRH KQLNGNGVDH KLDENDRAGL 300
  301 AKMIELSAQV WKEKTDPYLV FNRRIGNMYT PSLFAQLLAY LAADDCVTGE KSILFFAYGS 360
  361 GLASAIFPGR VRQTSNLDKI RQVAIRAIKR LDDRIQFTPE EFTETLQKRE VFLRSKEIPK 420
  421 SPSETSLFPN TYFLDNMDKL YRRSYTLHEE PNGVQNGNGI HH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.0
Match: 2p8uA
Description: No description for 2p8uA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle