| Protein: | CE09606 |
| Organism: | Caenorhabditis elegans |
| Length: | 583 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09606.
| Description | E-value | Query Range |
Subject Range |
|
|
477.0 | [0..2] | [565..950] |
|
Region A: Residues: [1-469] |
1 11 21 31 41 51
| | | | | |
1 MKVHQIADVL FRKKTFDGGS HLESQMKRCL TILDVMFIAI GHMIGAGIYV LTGSVVRNQA 60
61 GPAIILSFIF SGFAALLSAF SYAEFGARFP RAGSAYTYSY VGMGEIWAFI VGWTVPLEYM 120
121 IGNAAVARSW SAYFDNLVSK SVSNWTLDTV GRLSDGKGFF ALYPDFLAFF LLFLVAVAVA 180
181 MGSKFSANVN TSFVFLNLAV LAFVIICGLT YADFSLWSGT YQDGRSKFFP YGIQGAISGA 240
241 STCFFAFIGF EALATAGEEA KNPHRTIPLA TFTSLAIISV IYVLMGASLT LMIPYDLVDP 300
301 DAAFAAAFEM KGATVAKIIM SVGALAGMLN NLVTGSFALP RAVYAMADDG LIFGWFGVIN 360
361 SKTKTPLNAT IVFTIINAIL ALVFDLQALV DFLSIGTLLA YSMVSICVII LRHQSHLVDG 420
421 SATDYDNGGC LKSWVPFQGV WENFSEGISI RVAVAGLIFG YICLAIPFR
|
| Detection Method: |  |
| Confidence: | 1.52 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [470-583] |
1 11 21 31 41 51
| | | | | |
1 TGIFSNAGGI ILLTVGAAFS LLSFVFILGH EQNKSTSTYK VPLVPFIPCL GLLINVFMMV 60
61 YLNSMTWIRL FVWLAIGIVI YICYGIRHSK EGQKLSKIDV HNEIMSRTSD TKVH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
