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View Structure Prediction Details

Protein: CE09553
Organism: Caenorhabditis elegans
Length: 370 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09553.

Description E-value Query
Range
Subject
Range
CE35239 - status:Partially_confirmed UniProt:Q22899 protein_id:AAB18283.2
496.0 [0..1] [370..1]

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Predicted Domain #1
Region A:
Residues: [1-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRTMRGPFM FILGVIFSGF LFSMIYLKDN RIRDYQNSEA IIETRVQRSS RVELVKSVDK  60
   61 CDCVSEKSGK TYNFCYKDPQ NANSVGKKFS CDHLPILEKL NILEPSGSF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [110-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDLTDIAENS KNLIFASAAS DDHFQNEVGT ISAIYKYYPD AKFILYSLGL QAANISKLKS  60
   61 MFKNLEVRVF NTIGYPDYTN HWMEYRFKPL LLAELLKEHP NIWWMDAHLS VKKPNMVELM 120
  121 MKEVAEKTKK SETKVTVSIY FFIYSSHSNF ATLNTALLDY FPTNSIGLLK DPNLGSQMGA 180
  181 NTIYMARTQY TMETFKWWVL CALDYTCMKP PGAQVSCRFP NNDRNTQFAH CFRFDQSVLN 240
  241 LLMLNDFQDH HKYWSSLGHL F

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.11
Match: 1ss9A
Description: Crystal Structural Analysis of Active Site Mutant Q189E of LgtC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.2097350467072 bayes_pls_golite062009
transferase activity 0.75347715535193 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle