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View Structure Prediction Details

Protein: tag-123
Organism: Caenorhabditis elegans
Length: 655 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-123.

Description E-value Query
Range
Subject
Range
gi|73989439 - gi|73989439|ref|XP_534172.2| PREDICTED: similar to Transmembrane 9 superfamily protein member 2 prec...
875.0 [0..17] [655..29]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKTTRMLTK LLLVSFLASA SAFYLPGLAP VNFCEVEKAN CPSNISLYVN HLDSDRSVIP  60
   61 YEYHSFDFCT VNEDESP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [78-214]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VENLGQVLFG ERIRPSPYKV AFLQEEKCRL VCDTKKYARG SADDLAKLRL LQRAMTLNYQ  60
   61 HHWIVDNMPV TFCFKNLQNM DVCTTGFPVG CFVDEQGYQH DACVLNQKYK TPNNFYIFNH 120
  121 VDIEIYYRDM TNDGNFL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [215-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EHKVGGRIIR IDVKPRSIKH SSSSSLDCSD SAEPIAIDAK SESAEITYSY SIKWTKTDIK  60
   61 WSSRWDYILQ SMPHTNIQWF SIMNSLVIVL FLTGMVGMII MRTLHRDIDR YNRLDTEEDA 120
  121 QEEFGWKLVH GDVFRTPRYP MLLSVFIGAG CQTLLMVSVT LVFACLGFLS 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [385-509]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PANRGSLITF ALFFYVLFGI VAGYISARLY KTFEGIHWKT NLVMTAFLVP GILFTIFFFS  60
   61 NTLLWTKGSS AAVPFGTLLV LLVLWIFISV PMTFVGAYFG FKKRGIEAPV RTNKIPRQVP 120
  121 EQTFY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [510-655]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKPLPGMLMG GILPFGCIFI QLFFILNSIW AHQTYYMFGF LFLVYLILII TCSEATILLA  60
   61 YFHLCAEDYH WWWRSFMTSG FTAIYLFIYC IHFFNTKLTI SGTISTILYF SYTSIFVFMF 120
  121 FLMTGTIGFL ATYYFVRKIY GSVKVD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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