| Protein: | acr-11 |
| Organism: | Caenorhabditis elegans |
| Length: | 461 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acr-11.
| Description | E-value | Query Range |
Subject Range |
|
|
372.0 | [0..7] | [460..60] |
|
Region A: Residues: [1-354] |
1 11 21 31 41 51
| | | | | |
1 MIFNLINSIL SLVIIHSNLC DGSVAETKLF TDLLKGYNPL ERPVQNSSQP LEVKIKLFLQ 60
61 QILDVDEKNQ IVSVNAWLSY TWFDHKLQWE PKKYGGIQDI RFPGSSDHIW KPDVLLYNSA 120
121 AEDFDSTFKS NLLTYHTGTV VWIPPGVLKF VCQLDVTWFP FDDQVCEMKF GSWTFHGYAI 180
181 DLQIDDDTNG TQSMDLSTYL VNGEWQVIST NAKRVVSYYK CCPEPYPTVN YYLHIRRRTL 240
241 YYGFNLIIPS LLISLMAILG FMFPPDAGEK ITLEVTILLA IVFFLSMVSE MTPPTSEAVP 300
301 LIGVFFSCCM LVVSASVVFT IVVLNLHFRS ADSHEMNPLV RRVLLEFLPW LLFM
|
| Detection Method: |  |
| Confidence: | 69.522879 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [355-461] |
1 11 21 31 41 51
| | | | | |
1 SRPGYKFVKA NVIDSTDKMP KKPKNPLDCN LPSNHAGYEA QILLLHSVHT ELRRVVAFYN 60
61 KEEHDERIQT DWRFAAMVVD RACLLLFTVF IVISILAIMM SAPHIIA
|
| Detection Method: | |
| Confidence: | 34.69897 |
| Match: | 1oedA |
| Description: | Acetylcholine receptor protein, alpha chain |
Matching Structure (courtesy of the PDB): |
|
