YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: mdt-18
Organism: Caenorhabditis elegans
Length: 232 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mdt-18.

Description E-value Query
Range
Subject
Range
gi|46811818 - gi|46811818|gb|AAT02163.1| hypothetical protein L3ni56 isoform a [Dictyocaulus viviparus]
340.0 [0..7] [222..4]

Back

Predicted Domain #1
Region A:
Residues: [1-232]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNLVDIDED GTQEKLSVNS TPYQTQECVL YGSIFAKNVP DLERRLAGLC DPGCEEFFEH  60
   61 EMSFSLRSSG IMDIKTDIKL RRRFRTEHRI QNYWQLKYIG VPEPDQKCPT IVRKEISSLV 120
  121 HSQDMMTYAK SLGLRMDYEY MTQGKLWTKG NIKILHSILT STSRAGTYDS NSIKSVSDSA 180
  181 LVEISISLPE SAEYMPAAKS LRDFADQLMP LVNMEKVDYW KKMFPAQAAP RR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.19
Match: 2hzmB
Description: No description for 2hzmB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle