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View Structure Prediction Details

Protein: cyp-33C9
Organism: Caenorhabditis elegans
Length: 496 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cyp-33C9.

Description E-value Query
Range
Subject
Range
gi|115496944, gi... - gi|94574282|gb|AAI16042.1| Cytochrome P450, family 2, subfamily C, polypeptide 18 [Bos taurus], gi|1...
404.0 [0..16] [491..20]

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Predicted Domain #1
Region A:
Residues: [1-496]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLNIILVVV VAFLFHHLYW KRRNWPAGPT PLPLIGNLLS LRNPAPGYKA FARWTAKYGD  60
   61 IYTFWLGTRP YILVSSYEAL KETFIKDGET YADKKPMAFQ ESFRGGSYGV VETNGPFWRE 120
  121 HRRFAIHQFR DFGLGKDRME QRIMLEVEDI FNNCDKTIGE GVDLTDIFDR AVGNVINQML 180
  181 FGYRFDETRA DEFRTIRAFF NFNSGEFASF SMRVQFFLPW MGYIMPGPTI LDRFKKYQKG 240
  241 FTEFFGTQIE NHKKEIDFEL EENSDYVEAF LKEQRKREAS GDFESFSTKQ LSNMCLDLWF 300
  301 AALMTTSNTM TWCFAYTLNY LDAQQKLHEE LDRVIGSERH INTADKPNLP YTNAYINEIQ 360
  361 RTANLVPLNL LHMTTRDTVL KGYNIPKGTG VVAQISTVMY DENVFPEPYI FKPERFLDDD 420
  421 GKLKKVEQLV PFSVGKRQCL GEGLARMELF LFIANFFNRY RVVPDANGPP IIDKAVLGGM 480
  481 HTKEFKAILQ RRHVSE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 107.0
Match: 1pq2A
Description: Crystal Structure of Human Drug Metabolizing Cytochrome P450 2C8
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle