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View Structure Prediction Details

Protein: CE08911
Organism: Caenorhabditis elegans
Length: 368 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08911.

Description E-value Query
Range
Subject
Range
gi|1407625 - gi|1407625|gb|AAC50567.1| PTPsigma
365.0 [0..1] [364..1309]

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Predicted Domain #1
Region A:
Residues: [1-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSKSKEKK EKAKTSRRKS GSQTKKDTTS TVSEGKSPTE VADQLLKAKS RPQMYDLLKG  60
   61 HAAFNVPEFV KNLPVNVRLP IPIRDNRRVL CGSDEEFFPG QYVRMEGAEY IIVQAPTKKS 120
  121 SKLIWRVILK DHIRILVCLC HDEQMSGSDD GKCYTYFPTE LEQKMEAELM KGTLSIVCKA 180
  181 REGLSMGATK YELELTDSEV VIDKNSDDPN ASNYKSHRLI VFHMNTWSGQ KPTSGNALEQ 240
  241 AQNVALFFRE VKKFEMDILR KSMENFVPPV MLQSFDGINR ASTGWVALML LRDVEKRECF 300
  301 DVPSLIKAIM KFRNGSISTY YQFCFCMAVC LNIGKHTNWC ANDCSTALTD LMEKFGNRKL 360
  361 NELGNLAV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.522879
Match: 2fh7A
Description: Crystal structure of the phosphatase domains of human PTP SIGMA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle