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View Structure Prediction Details

Protein: CE08905
Organism: Caenorhabditis elegans
Length: 382 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CE08905.

Predicted Domain #1
Region A:
Residues: [1-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVSGESAAD IEEKTNGEPT QGKEQEQDEP AEEQSGRQSN AEDGSEEPNV GGSEHLREQL  60
   61 VDRPVATGGP QLNVDDLQDL DETLDVRRHA AQPTLPQVAN GQPERQNVEQ PRGGENPYEH 120
  121 RLLNQVEIDV YTQGQQSMID SNEEHQRAEQ NKINQANLLI EKCEQSNQLM QRQTEEVQRG 180
  181 DYPAPPGSQE RNETQGRFNQ RLLEISPRSR RLRENLVTSY NTENEARTEF NQNLRDQANP 240
  241 TFGNVGRMLL ALNESNRQRS DERTRISRDL QQIEQEVREI AAPQAVANQR YRRANAPDNL 300
  301 RRDQPSPAED PEGLGALMTP DEGENLEE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.39
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #2
Region A:
Residues: [329-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSSDNYEDEE DDEYADDHQE GPSNRGYKRP RRDSDGDDSG SYATKRPYDY LSKL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.966
Match: 1m1jC
Description: Fibrinogen C-terminal domains; Fibrinogen gamma chain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle