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View Structure Prediction Details

Protein: CE08854
Organism: Caenorhabditis elegans
Length: 258 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08854.

Description E-value Query
Range
Subject
Range
CE03141 - status:Partially_confirmed UniProt:Q19116 protein_id:CAA91937.1
291.0 [0..51] [245..1]
gi|39579537, gi|... - gi|39579537|emb|CAE56088.1| Hypothetical protein CBG23672 [Caenorhabditis briggsae], gi|187040872|em...
245.0 [0..51] [234..1]

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Predicted Domain #1
Region A:
Residues: [1-258]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADRAFASWE AANARMLRAG QILHADSYFF LYFYKLKTFC DEQLFCFSLI MMRFHNDFQK  60
   61 MERMRNMEFN LLFLLTVEMI ITIVGYYTKD TFGILNKNIT DTIYLFWIFN LLLASFFAGI 120
  121 LSPINFAIYR IAFRLAHSSA TAYIFYTTGF MMIPFYLVGY FLLESLYITN GISNQQMNYP 180
  181 SKWILNLADE YQKRTMVENI EGPRIHPFTS VACESIRKGA FEKNETFDDL FEYETAYEDV 240
  241 LFPIIQSSKS KRCGTFIV

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Detection Method: MSA

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle