| Protein: | srbc-19 |
| Organism: | Caenorhabditis elegans |
| Length: | 301 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srbc-19.
| Description | E-value | Query Range |
Subject Range |
|
|
295.0 | [0..4] | [294..7] |
|
Region A: Residues: [1-206] |
1 11 21 31 41 51
| | | | | |
1 MHTEQPKMNI SAVTISIFGV VSSVFSCAMN FYFLVKTERK KKDMALFYFR FSVDVLQGSI 60
61 VCVYLLFVIA YSLIPEELRK YHNLIFYLGF PSSNVDATRS MVSLAISMER VAAAYIPIFF 120
121 HNYRKRFPAV IIFMIAVIYG LNEDIVLYVF CNFKLNIPKN CAALGCAMNT CFFHYWTHQK 180
181 SVTFTITFVC LLLLCAKLFI FNELGR
|
| Detection Method: |  |
| Confidence: | 6.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [207-301] |
1 11 21 31 41 51
| | | | | |
1 NGRKELSRVN RLALIDSTIV CVFDFVPNFI ANQFAHKQFF SFQNIGPYIV VTKLAGCAIE 60
61 ACFVFWTFNR KTFKIKAQPK SRLPCQLGNF TNTDS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
