| Protein: | cdc-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 518 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cdc-6.
| Description | E-value | Query Range |
Subject Range |
|
|
248.0 | [0..88] | [517..76] |
|
Region A: Residues: [1-518] |
1 11 21 31 41 51
| | | | | |
1 MSSKSGSTRK SQRARDFEES EETEKPSLTR RKSSRLSTQS VPIEKKKTPS SKTTKRVPVS 60
61 ERVFHEEVES SSEDELLPQT KMASEEKRKL LLSPGSSLAD RVEKLEISSP RARGRPRKAT 120
121 NLKSQLTTPR TPEKQSRSRS GSQGTPEKKS RKESSSESDS EEIISTSSEG ALKGRREEFD 180
181 SLKLWIMKSK ETNTSLSIYV SGQPGTGKTA TTMRVLKSLG KSVRSCIVNC ASTNTKSALF 240
241 KTIFESLDLD GKPNEEIFEK HVKQFKTPLV LVLDEIDHLA NRKNAALYAA FQWPETLSRK 300
301 IIILGIANSI DLTERLLPKL MLAKPPKRLV FEPYTKDDIV EILNDKMKNE ETSIDAKAIE 360
361 LTARKVAAMS GDLRTALHIF KQQKSRMIPD DSKVPGTPVN GCREVLGIIN NVYSSPLARA 420
421 RLPLQPRILL AVSLTLSANK KCTFDRNSLL RAYYKACEAL RMPALDDDEL HSAFQTLESQ 480
481 SFVRQLNGGK LVLQVDAPTA KSAISDNAML DQIGLLQF
|
| Detection Method: |  |
| Confidence: | 46.0 |
| Match: | 1qvrA |
| Description: | Crystal Structure Analysis of ClpB |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.868980401898271 | bayes_pls_golite062009 |
