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View Structure Prediction Details

Protein: CE08675
Organism: Caenorhabditis elegans
Length: 331 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08675.

Description E-value Query
Range
Subject
Range
CE06788 - status:Partially_confirmed UniProt:Q17809 protein_id:AAB53814.1
339.0 [0..23] [330..30]

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Predicted Domain #1
Region A:
Residues: [1-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLIKQEHMH PPPRAITPLP PATHQITLEE YKEREKKDYY RDATKDASVK KVVLSLLKDH  60
   61 PGMWQNGNRF QPEKWRALGV DVYQRTGQIV RVNDMRKMLV MGKSVLKKKI AICIRDKKLD 120
  121 RAATEKDLWY WEYYRHFLYY RETLGQFEAN LRGEEWTGED QIQDEDDIIY DGMLDGDLSN 180
  181 SSHNFAGHGA DDDYQVEEVQ YSEAGFRRPE SVRGGDSYFG HGPPPQMV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [229-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSASNFSS ATQSHSRNRK SSSIDHTEVD RSAQHIAEQA KRLFLQYPEK SNLIRETMFK  60
   61 TILAFDDPSA DYQNVGEIFD DLAAQEAAKK RKRAENRAQR EQQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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