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View Structure Prediction Details

Protein: CE08620
Organism: Caenorhabditis elegans
Length: 379 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08620.

Description E-value Query
Range
Subject
Range
gi|91076632 - gi|91076632|ref|XP_970030.1| PREDICTED: similar to CG12233-PA, isoform A [Tribolium castaneum]
414.0 [0..1] [377..1]

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Predicted Domain #1
Region A:
Residues: [1-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRTVSSLS RVAPQTLGAV NAASSRQYSI TAPRPPTELN QKLKVTIIPG DGVGPELIYT  60
   61 VQDIVKQTGI PIEFEEIFLS EVHYTRSSSI ENAVESIGRN NNVALKGAIE ESAVLHTEGE 120
  121 LQGLNMRLRR SLDLFANVVH IKTLDGIKTR HGKQLDFVIV REQTEGEYSS LEHELVPGVI 180
  181 ECLKISTRTK AERIAKFAFD YATKTGRKKV TAVHKANIMK LGDGLFLRTC EGVAKQYPKI 240
  241 QFESMIIDNT CMQLVSKPEQ FDVMVMPNLY GNIIDNLAAG LVGGAGVVPG QSVGRDFVIF 300
  301 EPGSRHSFQE AMGRSIANPT AMILCAANML NHLHLDAWGN SLRQAVADVV KEGKVRTRDL 360
  361 GGYATTVDFA DAVIDKFRI

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Detection Method: PSI-BLAST
Confidence: 100.0
Match: 2d1cA
Description: No description for 2d1cA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle