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View Structure Prediction Details

Protein: CE08359
Organism: Caenorhabditis elegans
Length: 610 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08359.

Description E-value Query
Range
Subject
Range
CE27729 - status:Partially_confirmed UniProt:Q95X82 protein_id:AAK68202.1
828.0 [0..1] [610..1]

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Predicted Domain #1
Region A:
Residues: [1-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDEHYNPRN RLKTQIKRRS SCRNILNAVP PPPPTDFEGL EGFTDSCPAP TANNPFKVSS  60
   61 PQKKRQKPQV TFSQDDPFAA SISRSPDPLK TPTKGVRSSP RKRKSPQKF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [110-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERFQSFDPAL LQEFHPVDFS ALLATSSSAQ KPAEPAQESA EDLPTDLRIG SKMRIVSKVS  60
   61 FPWMNTRKST GNVIVKFQTN DRFDGMQYFN KTFLNGYEDP TVPLPVSPMS ILEAASLFYQ 120
  121 FPVIPGLKMY PRITAEQEYG GAHLQHLKFE FFCRNVSRV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [269-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLAPLVTSTM LEQWQECYAE LYSSYKKGQR GSFYVATAVC NVLFTKMPLS GGGDDVAADD  60
   61 TSQSCSQAFR GQKLVAVITH TTSAIREHLR SQGVDFEAPK PTSSLKRVSS SPQLHHDQS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [388-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLDCLLASES KENSQMGPTT FGGIENSENS DESPLKKDQD SDENESPMKL ANQWLNEIGV  60
   61 SPRTVKNTVS RELSSQVTDR AGFQCLVVHG SKIHALFNAL MDSDV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [493-610]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VHEKTGPYTK IPPTLIATSP FLYGQLLSLT KSSNIFAKAG TKCTEYELKL ENGPVLPHCA  60
   61 KMMTQFIRST NMCSTEEKPV TMQVMDRHTS QGMSDWTETA TNWNTVTIAE NCVKWTKN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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